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  5. XM_003055359.1

XM_003055359.1 (MicpuC2_1820, 1820)


Aliases : MicpuC2_1820, 1820

Description : Shikimate dehydrogenase substrate binding, N-terminal; SDH, C-terminal; 3-dehydroquinate dehydratase type I; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase [Interproscan].


Gene families : OG_01_0001801 (OrthoFinder) Phylogenetic Tree(s): OG0001801_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: XM_003055359.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
PTI_07G02130.1 No alias Shikimate dehydrogenase substrate binding, N-terminal;... 0.02 OrthoFinder
Sro2286_g322020.1 Contig20.g154 Pentafunctional AROM polypeptide 0.02 OrthoFinder
Sro3893_g351760.1 Contig3809.g29182 Pentafunctional AROM polypeptide 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 192 274
IPR001381 DHquinase_I 5 178
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 311 382
IPR041121 SDH_C 433 450
No external refs found!