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  5. XM_003055156.1

XM_003055156.1 (MicpuC2_46385, 46385)


Aliases : MicpuC2_46385, 46385

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002508 (OrthoFinder) Phylogenetic Tree(s): OG0002508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055156.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021350.16 tig00021350_g20633.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder
Cre10.g439100 30790162, CCT1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder
Cz06g06090.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Dusal.1206s00002.1 33197631 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
EOD16759 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
EOD21347 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
OT_03G03170.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Sro1027_g233030.1 Contig109.g1254 T-complex protein 1 subunit alpha (Fragment) 0.02 OrthoFinder
Transcript_contig_58198 58198 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
XM_002499911.1 MICPUN_90096, 90096 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05817.1_5977 PRW05817 T-complex 1 subunit alpha 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494500.1_3030 KAA8494500 T-complex protein 1 subunit alpha 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 29 534
No external refs found!