1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003054995.1

XM_003054995.1 (MicpuC2_24314, 24314)


Aliases : MicpuC2_24314, 24314

Description : AMP-binding enzyme, C-terminal domain; AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054995.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre01.g030900 30788595 Coenzyme metabolism.phylloquinone... 0.02 OrthoFinder
EOD33481 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.01 OrthoFinder
PTI_09G01950.1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
Sro461_g147630.1 Contig3552.g27417 7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39207.1_2689 PRW39207 Long-chain-fatty-acid-ligase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497344.1_1073 KAA8497344 4-coumarate--CoA ligase 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 401 499
IPR000873 AMP-dep_Synth/Lig 1 385
No external refs found!