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  5. XM_003054961.1

XM_003054961.1 (MicpuC2_50307, 50307)


Aliases : MicpuC2_50307, 50307

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0003330 (OrthoFinder) Phylogenetic Tree(s): OG0003330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054961.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cre03.g205800 30787098 No description available 0.06 OrthoFinder
Cz01g04190.t1 No alias WD40 repeat [Interproscan]. 0.05 OrthoFinder
EOD10877 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
OT_07G03850.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
PTI_12G03680.1 No alias WD40 repeat [Interproscan]. 0.05 OrthoFinder
Sro154_g069920.1 Contig2716.g21870 P21-activated protein kinase-interacting protein 1-like 0.05 OrthoFinder
TP05G03650.1 No alias WD40 repeat [Interproscan]. 0.05 OrthoFinder
Transcript_contig_58115 58115 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Vocar.0047s0009.1 32899290 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002503888.1 MICPUN_60045, 60045 WD40 repeat [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0030991 intraciliary transport particle A IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 87 127
IPR001680 WD40_repeat 132 169
No external refs found!