1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003054941.1

XM_003054941.1 (MicpuC2_13524, 13524)


Aliases : MicpuC2_13524, 13524

Description : LSM domain, eukaryotic/archaea-type [Interproscan].


Gene families : OG_01_0005497 (OrthoFinder) Phylogenetic Tree(s): OG0005497_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054941.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Sro181_g079050.1 Contig4257.g32232 Sm-like protein LSM5 0.02 OrthoFinder
lcl|VRMN01000014.1_cds_KAA8491329.1_2330 KAA8491329 Putative U6 snRNA-associated Sm-like protein LSm5 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
CC GO:0045277 respiratory chain complex IV IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 14 80
No external refs found!