1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003054907.1

XM_003054907.1 (MicpuC2_50196, 50196)


Aliases : MicpuC2_50196, 50196

Description : Geranyl pyrophosphate synthase (GGPS1)


Gene families : OG_01_0001967 (OrthoFinder) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054907.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Cre12.g484200 30791982, PPS2 Secondary metabolism.terpenoids.methylerythritol... 0.09 OrthoFinder
OT_12G01210.1 No alias Polyprenyl synthetase [Interproscan]. 0.08 OrthoFinder
PTI_04G03070.1 No alias Polyprenyl synthetase [Interproscan]. 0.04 OrthoFinder
Sro379_g130420.1 Contig3398.g26559 Heterodimeric geranylgeranyl pyrophosphate synthase... 0.06 OrthoFinder
TP03G04110.1 No alias Polyprenyl synthetase [Interproscan]. 0.05 OrthoFinder
Vocar.0031s0109.1 32890130 Polyprenyl synthetase [Interproscan]. 0.02 OrthoFinder
XM_002503601.1 MICPUN_104883, 104883 Geranyl pyrophosphate synthase (GGPS1) 0.09 OrthoFinder
lcl|BLLF01000279.1_cds_GFH09986.1_4463 HaLaN_05222, GFH09986 Geranylgeranyl pyrophosphate synthase GGPPS1 0.02 OrthoFinder
lcl|BLLF01000279.1_cds_GFH09988.1_4465 HaLaN_05225, GFH09988 Geranylgeranyl pyrophosphate synthase GGPPS1 0.02 OrthoFinder
lcl|BLLF01000413.1_cds_GFH11540.1_6017 HaLaN_07053, GFH11540 Geranylgeranyl pyrophosphate synthase GGPPS1 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39174.1_2776 PRW39174 Geranylgeranyl diphosphate synthase 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 74 314
No external refs found!