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  5. XM_003054877.1

XM_003054877.1 (MicpuC2_37849, 37849)


Aliases : MicpuC2_37849, 37849

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054877.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527100 30793034 ABC transporter G family member 28 OS=Arabidopsis thaliana 0.01 OrthoFinder
PTI_02G01550.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
PTI_16G01030.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.03 OrthoFinder
Sro538_g162620.1 Contig95.g1103 Putative white-brown complex homolog protein 30 0.06 OrthoFinder
Transcript_contig_89293 89293 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001486.1_cds_GFH19580.1_14057 HaLaN_16545, GFH19580 Hypothetical protein 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498383.1_7336 KAA8498383 ABC transporter G family member 14 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498384.1_7337 KAA8498384 ABC transporter G family member 22 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493197.1_9498 KAA8493197 ABC transporter G family member 15 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 326 521
IPR013525 ABC_2_trans 753 946
No external refs found!