1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003054875.1

XM_003054875.1 (MicpuC2_10773, 10773)


Aliases : MicpuC2_10773, 10773

Description : Hypothetical protein


Gene families : OG_01_0000198 (OrthoFinder) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054875.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.127 tig00000113_g5708.t1 No description available 0.01 OrthoFinder
Cre01.g028450 30788447 No description available 0.06 OrthoFinder
Cre02.g086550 30785530 No description available 0.02 OrthoFinder
Cz10g12170.t1 No alias Hypothetical protein 0.01 OrthoFinder
EOD05169 No alias Radical SAM [Interproscan]. 0.02 OrthoFinder
OT_01G01400.1 No alias Radical SAM [Interproscan]. 0.11 OrthoFinder
OT_03G05110.1 No alias Radical SAM [Interproscan]. 0.04 OrthoFinder
OT_05G03630.1 No alias Radical SAM [Interproscan]. 0.03 OrthoFinder
OT_12G02200.1 No alias 4Fe-4S single cluster domain; Radical SAM [Interproscan]. 0.03 OrthoFinder
XM_002503982.1 MICPUN_60237, 60237 Radical SAM [Interproscan]. 0.06 OrthoFinder
XM_002504959.1 MICPUN_86756, 86756 Radical SAM [Interproscan]. 0.1 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20249.1_5687 PRW20249 Radical SAM domain-containing 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496335.1_64 KAA8496335 Dual-specificity RNA methyltransferase RlmN 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!