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  5. XM_003054727.1

XM_003054727.1 (MicpuC2_46092, 46092)


Aliases : MicpuC2_46092, 46092

Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003054727.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cre05.g230600 30783444 External stimuli response.light.UV-B light.UVR8 photoreceptor 0.03 OrthoFinder
Cz07g00140.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Cz09g20160.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
EOD08802 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
EOD12398 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
Sro1383_g267950.1 Contig1647.g14854 RCC1 domain-containing protein 1 0.02 OrthoFinder
Transcript_contig_10133 10133 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_78125 78125 Ankyrin repeats (many copies); Regulator of chromosome... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0001401 SAM complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 96 144
IPR000408 Reg_chr_condens 389 441
IPR000408 Reg_chr_condens 444 497
IPR000408 Reg_chr_condens 331 385
IPR000408 Reg_chr_condens 263 324
IPR000408 Reg_chr_condens 150 202
No external refs found!