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  5. XM_002509211.1

XM_002509211.1 (MICPUN_98164, 98164)


Aliases : MICPUN_98164, 98164

Description : Helicase, C-terminal; Helicase-associated domain; DEAD/DEAH box helicase domain; Domain of unknown function DUF1605 [Interproscan].


Gene families : OG_01_0000129 (OrthoFinder) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002509211.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021094.26 tig00021094_g18111.t1 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz19g09190.t1 No alias Helicase, C-terminal; Domain of unknown function... 0.01 OrthoFinder
OT_02G03850.1 No alias Helicase-associated domain; Helicase, C-terminal;... 0.02 OrthoFinder
OT_06G02830.1 No alias Helicase-associated domain; Helicase, C-terminal; Domain... 0.02 OrthoFinder
OT_11G01980.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain; RWD... 0.02 OrthoFinder
Sro335_g119970.1 Contig3868.g29754 DExH-box ATP-dependent RNA helicase DExH1 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496925.1_654 KAA8496925 Putative ATP-dependent RNA helicase DHX57 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 447 537
IPR001650 Helicase_C 252 383
IPR011709 DUF1605 645 717
IPR011545 DEAD/DEAH_box_helicase_dom 3 157
No external refs found!