1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002509210.1

XM_002509210.1 (MICPUN_63142, 63142)


Aliases : MICPUN_63142, 63142

Description : Cdk-activating kinase assembly factor MAT1, centre [Interproscan].


Gene families : OG_01_0001180 (OrthoFinder) Phylogenetic Tree(s): OG0001180_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002509210.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
TP22G02030.1 No alias Hypothetical protein 0.01 OrthoFinder
Transcript_contig_55362 55362 Hypothetical protein 0.01 OrthoFinder
Vocar.0022s0228.1 32891960 Cdk-activating kinase assembly factor MAT1, centre... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR015877 Cdk-activating_kinase_MAT1_cen 7 90
No external refs found!