1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002509207.1

XM_002509207.1 (MICPUN_63150, 63150)


Aliases : MICPUN_63150, 63150

Description : OB-fold nucleic acid binding domain, AA-tRNA synthetase-type; Aminoacyl-tRNA synthetase, class II (D/K/N) [Interproscan].


Gene families : OG_01_0001128 (OrthoFinder) Phylogenetic Tree(s): OG0001128_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002509207.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cre03.g193800 30787698 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
Cz13g07110.t1 No alias Aminoacyl-tRNA synthetase, class II (D/K/N) [Interproscan]. 0.04 OrthoFinder
EOD06583 No alias Asparagine--tRNA ligase [Ensembl]. 0.02 OrthoFinder
OT_11G02100.1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
Sro791_g202920.1 Contig1638.g14758 Asparagine--tRNA ligase 0.03 OrthoFinder
Transcript_contig_55995 55995 Aminoacyl-tRNA synthetase, class II (D/K/N) [Interproscan]. 0.01 OrthoFinder
XM_003061459.1 MicpuC2_51256, 51256 OB-fold nucleic acid binding domain, AA-tRNA... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 207 268
IPR004364 Aa-tRNA-synt_II 355 619
IPR004365 NA-bd_OB_tRNA 110 186
No external refs found!