XM_002509158.1 (MICPUN_106364, 106364)

Aliases : MICPUN_106364, 106364

Description : Photosystem II 13kD protein, chloroplast precursor (PSBW2)

Gene families : OG_01_0007188 (OrthoFinder) Phylogenetic Tree(s): OG0007188_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002509158.1
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Cz19g05110.t1	No alias	Photosystem II PsbW, class 2 [Interproscan].	0.06	OrthoFinder
OT_02G02080.1	No alias	Photosystem II PsbW, class 2 [Interproscan].	0.03	OrthoFinder
Transcript_contig_58915	58915	Photosystem II PsbW, class 2 [Interproscan].	0.02	OrthoFinder
XM_003061506.1	MicpuC2_51380, 51380	Photosystem II 13kD protein, chloroplast precursor (PSBW2)	0.04	OrthoFinder
lcl\|BLLF01001211.1_cds_GFH17846.1_12323	HaLaN_14558, GFH17846	Photosystem II PsbW, class 2 [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IEA	Interproscan
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Enrichment
BP	GO:0007034	vacuolar transport	IEP	Enrichment
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR009806	PSII_PsbW_class2	6	118

External Links

No external refs found!