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  5. XM_002509034.1

XM_002509034.1 (MICPUN_98146, 98146)


Aliases : MICPUN_98146, 98146

Description : DNA primase large subunit, eukaryotic/archaeal [Interproscan].


Gene families : OG_01_0003034 (OrthoFinder) Phylogenetic Tree(s): OG0003034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002509034.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.68 tig00020848_g14599.t1 Cell cycle.interphase.DNA replication.elongation.DNA... 0.09 OrthoFinder
Cre06.g293000 30779460, PRI2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.1 OrthoFinder
Cz11g15130.t1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.05 OrthoFinder
Dusal.0802s00002.1 33199448 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.02 OrthoFinder
EOD09588 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.07 OrthoFinder
OT_11G00950.1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.11 OrthoFinder
PTI_11G02500.1 No alias DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.06 OrthoFinder
Sro1384_g268120.1 Contig2234.g18574 Primase large subunit 0.1 OrthoFinder
Vocar.0024s0257.1 32890471 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.05 OrthoFinder
XM_003061641.1 MicpuC2_44706, 44706 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01002033.1_cds_GFH22403.1_16880 HaLaN_19863, GFH22403 DNA primase large subunit, eukaryotic/archaeal [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002033.1_cds_GFH22406.1_16883 HaLaN_19866, GFH22406 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493338.1_9639 KAA8493338 Putative DNA primase large subunit 0.07 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006269 DNA replication, synthesis of RNA primer IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007096 regulation of exit from mitosis IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0033566 gamma-tubulin complex localization IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR007238 DNA_primase_lsu_euk/arc 157 427
No external refs found!