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  5. XM_002509028.1

XM_002509028.1 (MICPUN_106331, 106331)


Aliases : MICPUN_106331, 106331

Description : Spermidine synthase, tetramerisation domain; Spermine/spermidine synthase domain [Interproscan].


Gene families : OG_01_0002535 (OrthoFinder) Phylogenetic Tree(s): OG0002535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002509028.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000581.33 tig00000581_g2240.t1 Enzyme classification.EC_2 transferases.EC_2.5... 0.02 OrthoFinder
Cre12.g558450 30792728, SPD1 Enzyme classification.EC_2 transferases.EC_2.5... 0.02 OrthoFinder
Cz06g13210.t1 No alias Spermine/spermidine synthase domain [Interproscan]. 0.03 OrthoFinder
EOD18412 No alias Spermidine synthase [Ensembl]. 0.02 OrthoFinder
OT_11G01130.1 No alias Spermine/spermidine synthase domain; Spermidine... 0.03 OrthoFinder
lcl|BLLF01000849.1_cds_GFH15430.1_9907 HaLaN_11658, GFH15430 Spermidine synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR035246 Spermidine_synt_N 25 80
No external refs found!