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  5. XM_002509009.1

XM_002509009.1 (MICPUN_109273, 109273)


Aliases : MICPUN_109273, 109273

Description : Ribosomal protein L24 [Interproscan].


Gene families : OG_01_0001143 (OrthoFinder) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002509009.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000455.16 tig00000455_g1004.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020554.24 tig00020554_g10809.t1 No description available 0.01 OrthoFinder
Cre07.g330450 30774865 Protein biosynthesis.organelle translation... 0.03 OrthoFinder
Cre16.g652550 30778177, PRPL24 Protein biosynthesis.organelle translation... 0.25 OrthoFinder
Cz13g14230.t1 No alias Ribosomal protein L24 [Interproscan]. 0.17 OrthoFinder
Dusal.0030s00023.1 33195298 KOW; Ribosomal protein L24 [Interproscan]. 0.06 OrthoFinder
EOD09147 No alias Ribosomal protein L24 [Interproscan]. 0.03 OrthoFinder
EOD36197 No alias Ribosomal protein L24 [Interproscan]. 0.05 OrthoFinder
EOD38740 No alias Ribosomal protein L24 [Interproscan]. 0.03 OrthoFinder
OT_11G00790.1 No alias Ribosomal protein L24 [Interproscan]. 0.21 OrthoFinder
Sro1177_g249450.1 Contig1274.g11886 Protein L24 0.06 OrthoFinder
Sro51_chlor_g029590.1 Rpl24 Rpl24 0.1 OrthoFinder
Vocar.0032s0031.1 32893715 Ribosomal protein L24; KOW [Interproscan]. 0.05 OrthoFinder
XM_003061663.1 MicpuC2_37566, 37566 Ribosomal protein L24 [Interproscan]. 0.12 OrthoFinder
lcl|BLLF01000635.1_cds_GFH13638.1_8115 HaLaN_09566, GFH13638 KOW domain-containing protein 0.11 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20692.1_5226 PRW20692 50S ribosomal chloroplastic 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 98 160
No external refs found!