1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002508933.1

XM_002508933.1 (MICPUN_87045, 87045)


Aliases : MICPUN_87045, 87045

Description : IBR domain [Interproscan].


Gene families : OG_01_0000507 (OrthoFinder) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508933.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cre16.g682350 30777070 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
EOD38250 No alias IBR domain; Zinc finger, C3HC4 RING-type [Interproscan]. 0.04 OrthoFinder
Sro2627_g332970.1 Contig3601.g27851 Protein ligase ARIH1 0.01 OrthoFinder
Transcript_contig_54036 54036 IBR domain [Interproscan]. 0.01 OrthoFinder
Vocar.0018s0139.1 32898463 IBR domain [Interproscan]. 0.02 OrthoFinder
Vocar.0024s0099.1 32890434 Zinc finger, C3HC4 RING-type; IBR domain [Interproscan]. 0.02 OrthoFinder
XM_003061734.1 MicpuC2_63049, 63049 IBR domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60234.1_4427 PRW60234 Putative E3 ubiquitin-ligase ARI2 isoform X1 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002867 IBR_dom 273 319
IPR002867 IBR_dom 193 256
No external refs found!