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  5. XM_002508915.1

XM_002508915.1 (MICPUN_63254, 63254)


Aliases : MICPUN_63254, 63254

Description : Ribosomal protein L38e [Interproscan].


Gene families : OG_01_0004462 (OrthoFinder) Phylogenetic Tree(s): OG0004462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508915.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021719.6 tig00021719_g23151.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder
Cre07.g325746 30775115, RPL38 Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 OrthoFinder
Cz01g08210.t1 No alias Ribosomal protein L38e [Interproscan]. 0.16 OrthoFinder
Dusal.0190s00012.1 33189449 Ribosomal protein L38e [Interproscan]. 0.07 OrthoFinder
OT_11G02560.1 No alias Ribosomal protein L38e [Interproscan]. 0.06 OrthoFinder
PTI_05G02170.1 No alias Ribosomal protein L38e [Interproscan]. 0.18 OrthoFinder
TP02G00250.1 No alias Ribosomal protein L38e [Interproscan]. 0.09 OrthoFinder
Transcript_contig_61849 61849 Ribosomal protein L38e [Interproscan]. 0.01 OrthoFinder
Vocar.0003s0165.1 32889359 Ribosomal protein L38e [Interproscan]. 0.07 OrthoFinder
XM_003061755.1 MicpuC2_51368, 51368 Ribosomal protein L38e [Interproscan]. 0.12 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59048.1_7123 PRW59048 60S ribosomal L38 0.1 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497647.1_6600 KAA8497647 60S ribosomal protein L38 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 2 69
No external refs found!