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  5. XM_002508896.1

XM_002508896.1 (MICPUN_92170, 92170)


Aliases : MICPUN_92170, 92170

Description : Sec23/Sec24, helical domain; Sec23/Sec24, trunk domain; Sec23/Sec24 beta-sandwich; Zinc finger, Sec23/Sec24-type; Gelsolin-like domain [Interproscan].


Gene families : OG_01_0000893 (OrthoFinder) Phylogenetic Tree(s): OG0000893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508896.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cre02.g091150 30786099, SEC24A Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder
Cz15g00040.t1 No alias Sec23/Sec24, trunk domain; Sec23/Sec24 beta-sandwich;... 0.02 OrthoFinder
OT_11G02520.1 No alias Sec23/Sec24 beta-sandwich; Zinc finger,... 0.03 OrthoFinder
OT_12G02410.1 No alias Sec23/Sec24 beta-sandwich; Sec23/Sec24, trunk domain;... 0.03 OrthoFinder
Sro196_g083380.1 Contig3206.g25334 Transport protein SEC24 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 682 753
IPR012990 Sec23_24_beta_S 459 543
IPR006900 Sec23/24_helical_dom 554 652
IPR006896 Sec23/24_trunk_dom 212 454
IPR006895 Znf_Sec23_Sec24 138 175
No external refs found!