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  5. XM_002508580.1

XM_002508580.1 (MICPUN_62208, 62208)


Aliases : MICPUN_62208, 62208

Description : Syntaxin, N-terminal domain; Target SNARE coiled-coil homology domain [Interproscan].


Gene families : OG_01_0002825 (OrthoFinder) Phylogenetic Tree(s): OG0002825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508580.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre13.g588550 30783952 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder
Dusal.0078s00007.1 33203818 Target SNARE coiled-coil homology domain; Syntaxin,... 0.02 OrthoFinder
TP03G00040.1 No alias Syntaxin, N-terminal domain; Target SNARE coiled-coil... 0.03 OrthoFinder
XM_003063870.1 MicpuC2_49758, 49758 Syntaxin, N-terminal domain; Target SNARE coiled-coil... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 265 317
IPR006011 Syntaxin_N 59 264
No external refs found!