1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002508574.1

XM_002508574.1 (MICPUN_104963, 104963)


Aliases : MICPUN_104963, 104963

Description : Uroporphyrinogen decarboxylase chloroplast precursor (HEME2)


Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508574.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.48 tig00021319_g20242.t1 Coenzyme metabolism.tetrapyrrol... 0.04 OrthoFinder
Cre02.g073700 30785831, UPD3 Coenzyme metabolism.tetrapyrrol... 0.13 OrthoFinder
Cre02.g076300 30785008, UPD2 Coenzyme metabolism.tetrapyrrol... 0.12 OrthoFinder
Cre11.g467700 30776050, UPD1 Coenzyme metabolism.tetrapyrrol... 0.11 OrthoFinder
Cz14g23190.t1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.1 OrthoFinder
Cz16g13070.t1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.1 OrthoFinder
Dusal.0096s00026.1 33195840 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.02 OrthoFinder
EOD39324 No alias Uroporphyrinogen decarboxylase [Ensembl]. 0.02 OrthoFinder
OT_01G03410.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.15 OrthoFinder
OT_12G02430.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.12 OrthoFinder
OT_17G00160.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.15 OrthoFinder
PTI_04G05280.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.04 OrthoFinder
PTI_10G00460.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.05 OrthoFinder
Sro1503_g278020.1 Contig1159.g11075 Uroporphyrinogen decarboxylase 0.1 OrthoFinder
Sro350_g123690.1 Contig1556.g14139 Uroporphyrinogen decarboxylase 0.09 OrthoFinder
Sro80_g043120.1 Contig92.g1056 Uroporphyrinogen decarboxylase 0.09 OrthoFinder
TP02G01280.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.07 OrthoFinder
TP03G09170.1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.07 OrthoFinder
Transcript_contig_59670 59670 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.04 OrthoFinder
Transcript_contig_78240 78240 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.01 OrthoFinder
UNPLg00178.t1 No alias Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.03 OrthoFinder
Vocar.0012s0224.1 32894830 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.04 OrthoFinder
Vocar.0056s0027.1 32896685 Uroporphyrinogen decarboxylase (URO-D) [Interproscan]. 0.06 OrthoFinder
XM_003055316.1 MicpuC2_49908, 49908 Uroporphyrinogen decarboxylase chloroplast precursor (HEME1) 0.07 OrthoFinder
XM_003064073.1 MicpuC2_23171, 23171 Uroporphyrinogen decarboxylase chloroplast precursor (HEME2) 0.09 OrthoFinder
lcl|BLLF01000412.1_cds_GFH11531.1_6008 HaLaN_07044, GFH11531 Uroporphyrinogen decarboxylase 0.02 OrthoFinder
lcl|BLLF01000728.1_cds_GFH14454.1_8931 HaLaN_10514, GFH14454 Uroporphyrinogen decarboxylase 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45352.1_1514 PRW45352 Uroporphyrinogen decarboxylase chloroplast precursor 0.04 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18323.1_5795 PRW18323 Uroporphyrinogen decarboxylase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497188.1_917 KAA8497188 Uroporphyrinogen decarboxylase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0032048 cardiolipin metabolic process IEP Enrichment
BP GO:0032049 cardiolipin biosynthetic process IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
BP GO:0046471 phosphatidylglycerol metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000257 Uroporphyrinogen_deCOase 51 387
No external refs found!