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  5. XM_002508552.1

XM_002508552.1 (MICPUN_62154, 62154)


Aliases : MICPUN_62154, 62154

Description : Zinc finger, C3HC4 RING-type; Zinc finger, PHD-finger [Interproscan].


Gene families : OG_01_0000700 (OrthoFinder) Phylogenetic Tree(s): OG0000700_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508552.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre08.g380151 30774050 No description available 0.03 OrthoFinder
Dusal.0388s00010.1 33197672 Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
Dusal.0759s00003.1 33194751 Hypothetical protein 0.02 OrthoFinder
EOD15377 No alias Zinc finger, PHD-finger [Interproscan]. 0.02 OrthoFinder
Vocar.0042s0028.1 32892021 FY-rich, C-terminal; Zinc finger, PHD-finger; Methyl-CpG... 0.02 OrthoFinder
XM_003061812.1 MicpuC2_51493, 51493 Zinc finger, PHD-finger [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 54 92
IPR019787 Znf_PHD-finger 156 199
No external refs found!