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  5. Cpa|evm.model.tig00000190.17

Cpa|evm.model.tig00000190.17 (tig00000190_g13838.t1)


Aliases : tig00000190_g13838.t1

Description : Probable histidine kinase 3 OS=Oryza sativa subsp. indica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000190.17
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre17.g733150 30781867 Histidine kinase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0675s00001.1 33202443 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.02 OrthoFinder
Sro1169_g248620.1 Contig2988.g23734 Respiration control sensor protein ArcB 0.02 OrthoFinder
Sro1466_g275080.1 Contig2211.g18351 Peroxide stress-activated histidine kinase mak2 0.02 OrthoFinder
Sro14_g010640.1 Contig1128.g10813 Respiration control sensor protein ArcB 0.01 OrthoFinder
Sro156_g070980.1 Contig473.g6436 Sensor protein kinase WalK (Fragment) 0.02 OrthoFinder
Sro164_g073700.1 Contig4339.g32744 Peroxide stress-activated histidine kinase mak2 0.02 OrthoFinder
Sro20_g014160.1 Contig2954.g23446 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro28_g018500.1 Contig404.g5459 Sensor protein kinase WalK (Fragment) 0.02 OrthoFinder
Sro325_g117780.1 Contig3568.g27567 Respiration control sensor protein ArcB 0.02 OrthoFinder
Sro33_g021480.1 Contig2613.g21169 Sensor kinase/phosphatase LuxQ 0.02 OrthoFinder
Sro351_g124000.1 Contig4381.g32954 Respiration control sensor protein ArcB 0.01 OrthoFinder
Sro369_g128120.1 Contig1690.g15135 Hybrid signal transduction histidine kinase J 0.01 OrthoFinder
Sro508_g156640.1 Contig2824.g22619 Hybrid signal transduction histidine kinase K 0.02 OrthoFinder
Sro548_g164350.1 Contig1714.g15315 Sensor protein kinase WalK (Fragment) 0.02 OrthoFinder
TP22G01730.1 No alias Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
lcl|BLLF01000478.1_cds_GFH12211.1_6688 HaLaN_07851, GFH12211 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.01 OrthoFinder
lcl|BLLF01001311.1_cds_GFH18511.1_12988 HaLaN_15330, GFH18511 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003144.1_cds_GFH26484.1_20961 HaLaN_24642, GFH26484 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|BLLF01008570.1_cds_GFH33431.1_27908 HaLaN_32803, GFH33431 Chlamyopsin-6 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57078.1_9242 PRW57078 Hybrid sensor histidine kinase response regulator 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 573 664
IPR013767 PAS_fold 73 131
No external refs found!