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  5. XM_002508379.1

XM_002508379.1 (MICPUN_69279, 69279)


Aliases : MICPUN_69279, 69279

Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508379.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000430.61 tig00000430_g653.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00021178.12 tig00021178_g19202.t2 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021352.24 tig00021352_g20694.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.03 OrthoFinder
EOD23616 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
EOD26777 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
Sro289_g109030.1 Contig4471.g33587 RCC1 and BTB domain-containing protein 2 0.03 OrthoFinder
SymbC1.scaffold3997.3 3997.3 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_58480 58480 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Vocar.0017s0213.1 32891365 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_003060621.1 MicpuC2_69057, 69057 Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
XM_003062733.1 MicpuC2_42406, 42406 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002473.1_cds_GFH24209.1_18686 HaLaN_21957, GFH24209 UV-resistance 8 protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 2 48
IPR000408 Reg_chr_condens 214 243
IPR000408 Reg_chr_condens 104 159
IPR000408 Reg_chr_condens 163 211
IPR000408 Reg_chr_condens 52 100
No external refs found!