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  5. XM_002508297.1

XM_002508297.1 (MICPUN_102066, 102066)


Aliases : MICPUN_102066, 102066

Description : Central pair complex 1 (CPC1)


Gene families : OG_01_0005247 (OrthoFinder) Phylogenetic Tree(s): OG0005247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508297.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020572.58 tig00020572_g11579.t1 No description available 0.01 OrthoFinder
Cre03.g183200 30787554, CPC1 No description available 0.08 OrthoFinder
Cz01g35170.t1 No alias CH-like domain in sperm protein [Interproscan]. 0.02 OrthoFinder
Dusal.0677s00001.1 33191186 CH-like domain in sperm protein [Interproscan]. 0.02 OrthoFinder
Vocar.0015s0258.1 32899010 CH-like domain in sperm protein [Interproscan]. 0.06 OrthoFinder
XM_003058994.1 MicpuC2_39998, 39998 Central pair complex 1 (CPC1) 0.03 OrthoFinder
lcl|BLLF01000070.1_cds_GFH07037.1_1514 HaLaN_01779, GFH07037 CH_2 domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000070.1_cds_GFH07038.1_1515 HaLaN_01780, GFH07038 CH_2 domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000903.1_cds_GFH15805.1_10282 HaLaN_12106, GFH15805 CH_2 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
InterPro domains Description Start Stop
IPR010441 CH_2 5 64
No external refs found!