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  5. XM_002508232.1

XM_002508232.1 (MICPUN_108805, 108805)


Aliases : MICPUN_108805, 108805

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0003436 (OrthoFinder) Phylogenetic Tree(s): OG0003436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508232.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.30 tig00020903_g15096.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder
Cre09.g416750 30781340, CCT2 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.16 OrthoFinder
Cz12g27040.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
Dusal.0437s00014.1 33198276 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
EOD03984 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.09 OrthoFinder
EOD34861 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.09 OrthoFinder
OT_08G02610.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
Sro2362_g324860.1 Contig1769.g15640 Thermosome subunit beta (Fragment) 0.1 OrthoFinder
TP04G07770.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Vocar.0011s0268.1 32895339 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_003058918.1 MicpuC2_45559, 45559 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000191.1_cds_GFH08872.1_3349 HaLaN_03911, GFH08872 T-complex 1 subunit beta 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010970 transport along microtubule IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0019905 syntaxin binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042073 intraciliary transport IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0099111 microtubule-based transport IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 3 471
No external refs found!