Aliases : MICPUN_60725, 60725
Description : GC-rich sequence DNA-binding factor-like domain [Interproscan].
Gene families : OG_01_0005288 (OrthoFinder) Phylogenetic Tree(s): OG0005288_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_002508177.1 | |
Cluster | HCCA: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz09g18010.t1 | No alias | GC-rich sequence DNA-binding factor-like domain [Interproscan]. | 0.04 | OrthoFinder | |
Transcript_contig_57452 | 57452 | Hypothetical protein | 0.01 | OrthoFinder | |
Vocar.0002s0176.1 | 32890611 | GC-rich sequence DNA-binding factor-like domain [Interproscan]. | 0.02 | OrthoFinder | |
XM_003057218.1 | MicpuC2_46682, 46682 | GC-rich sequence DNA-binding factor-like domain [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Enrichment |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022783 | GCFC_dom | 474 | 686 |
No external refs found! |