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  5. XM_002508129.1

XM_002508129.1 (MICPUN_60632, 60632)


Aliases : MICPUN_60632, 60632

Description : Ubiquitin


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508129.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cz01g18100.t1 No alias Sde2, N-terminal ubiquitin domain [Interproscan]. 0.03 OrthoFinder
Cz16g13170.t1 No alias Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
EOD19048 No alias Superoxide dismutase, Nickel-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1337.4 1337.4 Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. 0.02 OrthoFinder
XM_003061910.1 MicpuC2_28921, 28921 Ubiquitin 0.02 OrthoFinder
XM_003063226.1 MicpuC2_36384, 36384 Ubiquitin-like domain; Superoxide dismutase, Nickel-type... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 231 302
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 155 226
IPR000626 Ubiquitin-like_dom 307 378
No external refs found!