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  5. XM_002508078.1

XM_002508078.1 (MICPUN_105920, 105920)


Aliases : MICPUN_105920, 105920

Description : Voltage-gated ion channel superfamily (CAV2)


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002508078.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.4 tig00000254_g22450.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021133.6 tig00021133_g18906.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021133.7 tig00021133_g18906.t1 No description available 0.02 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.02 OrthoFinder
Cre16.g667451 30777477 No description available 0.02 OrthoFinder
Cz08g09230.t1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
EOD26760 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
OT_01G06690.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_04G02850.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_06G02060.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0321.1 32889539 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_003056769.1 MicpuC2_32293, 32293 Voltage-gated ion channel superfamily 0.02 OrthoFinder
XM_003060618.1 MicpuC2_60, 60 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_003062020.1 MicpuC2_21004, 21004 Voltage-gated ion channel superfamily 0.03 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21007.1_4821 PRW21007 Voltage-gated ion channel superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 1408 1675
IPR005821 Ion_trans_dom 589 876
IPR005821 Ion_trans_dom 959 1350
IPR005821 Ion_trans_dom 59 372
No external refs found!