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  5. XM_002507915.1

XM_002507915.1 (MICPUN_91476, 91476)


Aliases : MICPUN_91476, 91476

Description : Ribosomal protein L23/L25, N-terminal; Ribosomal protein L25/L23 [Interproscan].


Gene families : OG_01_0004081 (OrthoFinder) Phylogenetic Tree(s): OG0004081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002507915.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000037.39 tig00000037_g10108.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 OrthoFinder
Cpa|evm.model.tig00020965.10 tig00020965_g16831.t1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cre06.g282500 30779252, RPL23a Protein biosynthesis.cytosolic ribosome.large subunit... 0.34 OrthoFinder
Cz15g20240.t1 No alias Ribosomal protein L23/L25, N-terminal; Ribosomal protein... 0.22 OrthoFinder
Dusal.0705s00006.1 33186300 Ribosomal protein L23/L25, N-terminal; Ribosomal protein... 0.16 OrthoFinder
OT_08G04160.1 No alias Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.22 OrthoFinder
PTI_08G02770.1 No alias Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.18 OrthoFinder
Sro521_g159410.1 Contig1979.g16931 60S ribosomal protein L23A 0.43 OrthoFinder
TP06G05220.1 No alias Ribosomal protein L23/L25, N-terminal; Ribosomal protein... 0.31 OrthoFinder
Vocar.0002s0021.1 32890790 Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.2 OrthoFinder
XM_003058530.1 MicpuC2_33613, 33613 Ribosomal protein L25/L23; Ribosomal protein L23/L25,... 0.15 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34016.1_3146 PRW34016 60S ribosomal L23A 0.09 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496143.1_2141 KAA8496143 60S ribosomal protein L23a 0.17 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 64 125
IPR005633 Ribosomal_L23/L25_N 6 53
No external refs found!