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Aliases : MICPUN_84175, 84175
Description : LSM domain, eukaryotic/archaea-type [Interproscan].
Gene families : OG_01_0000904 (OrthoFinder) Phylogenetic Tree(s): OG0000904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002507873.1 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre10.g455300 | 30789915 | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder | |
| SymbC1.scaffold3926.5 | 3926.5 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
| TP13G00410.1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
| UNPLg00366.t1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003059126.1 | MicpuC2_69519, 69519 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Enrichment |
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0032977 | membrane insertase activity | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0043631 | RNA polyadenylation | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| MF | GO:0051087 | chaperone binding | IEP | Enrichment |
| MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 15 | 78 |
| No external refs found! |