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Aliases : MICPUN_60573, 60573
Description : Zinc finger, RING-type [Interproscan].
Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002507807.1 | |
| Cluster | HCCA: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000950.13 | tig00000950_g5769.t1 | No description available | 0.02 | OrthoFinder | |
| OT_10G03130.1 | No alias | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_04G01330.1 | No alias | PA domain; Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1292_g260020.1 | Contig3668.g28343 | Protein ligase Arkadia | 0.01 | OrthoFinder | |
| Vocar.0027s0070.1 | 32887136 | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003062145.1 | MicpuC2_9885, 9885 | Zinc finger, RING-type [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497645.1_6598 | KAA8497645 | E3 ubiquitin-protein ligase ATL9 | 0.02 | OrthoFinder | |
| lcl|VRMN01000016.1_cds_KAA8491038.1_9795 | KAA8491038 | E3 ubiquitin-protein ligase RNF12 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Enrichment |
| MF | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | IEP | Enrichment |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Enrichment |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Enrichment |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Enrichment |
| MF | GO:0005253 | anion channel activity | IEP | Enrichment |
| MF | GO:0005254 | chloride channel activity | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| BP | GO:0006821 | chloride transport | IEP | Enrichment |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0015939 | pantothenate metabolic process | IEP | Enrichment |
| BP | GO:0015940 | pantothenate biosynthetic process | IEP | Enrichment |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Enrichment |
| BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
| MF | GO:0016715 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 351 | 393 |
| No external refs found! |