XM_002507605.1 (MICPUN_112659, 112659)


Aliases : MICPUN_112659, 112659

Description : 60S ribosomal protein L19 (RPL19)


Gene families : OG_01_0002658 (OrthoFinder) Phylogenetic Tree(s): OG0002658_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002507605.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021181.1 tig00021181_g19305.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 OrthoFinder
Cre02.g075700 30785746, RPL19 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz11g15180.t1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.14 OrthoFinder
Dusal.0530s00005.1 33203474 Ribosomal protein L19/L19e [Interproscan]. 0.17 OrthoFinder
EOD07611 No alias Ribosomal protein L19/L19e [Interproscan]. 0.03 OrthoFinder
OT_02G02430.1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.37 OrthoFinder
PTI_21G02720.1 No alias Ribosomal protein L19/L19e; Chlorophyll A-B binding... 0.37 OrthoFinder
Sro734_g194640.1 Contig3769.g28942 60S ribosomal protein L19 0.45 OrthoFinder
TP02G08540.1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.16 OrthoFinder
Transcript_contig_90584 90584 Ribosomal protein L19/L19e [Interproscan]. 0.04 OrthoFinder
Vocar.0001s1683.1 32884888 Ribosomal protein L19/L19e [Interproscan]. 0.07 OrthoFinder
XM_003055988.1 MicpuC2_49436, 49436 60S ribosomal protein L19 protein (RPL19) 0.06 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32846.1_3749 PRW32846 60S ribosomal L19-2 isoform A 0.18 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32847.1_3748 PRW32847 60S ribosomal L19-2 isoform B 0.05 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490961.1_6164 KAA8490961 60S ribosomal protein L19-2 0.18 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0004664 prephenate dehydratase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009094 L-phenylalanine biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 146
No external refs found!