Aliases : MICPUN_96775, 96775
Description : Peptide deformylase, chloroplast precursor (PDF)
Gene families : OG_01_0001537 (OrthoFinder) Phylogenetic Tree(s): OG0001537_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_002507376.1 | |
Cluster | HCCA: Cluster_89 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PTI_07G01170.1 | No alias | Peptide deformylase [Interproscan]. | 0.02 | OrthoFinder | |
XM_003055279.1 | MicpuC2_13172, 13172 | Peptide deformylase (PDF) | 0.02 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496105.1_2103 | KAA8496105 | Peptide deformylase 1B, chloroplastic | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Enrichment |
BP | GO:0006325 | chromatin organization | IEP | Enrichment |
BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006605 | protein targeting | IEP | Enrichment |
BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Enrichment |
MF | GO:0033218 | amide binding | IEP | Enrichment |
BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
MF | GO:0042277 | peptide binding | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0051668 | localization within membrane | IEP | Enrichment |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023635 | Peptide_deformylase | 85 | 233 |
No external refs found! |