1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002507094.1

XM_002507094.1 (MICPUN_114038, 114038)


Aliases : MICPUN_114038, 114038

Description : 60S ribosomal protein L36 (RPL36)


Gene families : OG_01_0003108 (OrthoFinder) Phylogenetic Tree(s): OG0003108_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002507094.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.69 tig00021493_g21908.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cre12.g484050 30792099, RPL36 Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder
Cz06g33040.t1 No alias Ribosomal protein L36e [Interproscan]. 0.21 OrthoFinder
Dusal.1916s00002.1 33187807 Ribosomal protein L36e [Interproscan]. 0.07 OrthoFinder
EOD30407 No alias Ribosomal protein L36e [Interproscan]. 0.12 OrthoFinder
OT_02G00860.1 No alias Ribosomal protein L36e [Interproscan]. 0.16 OrthoFinder
PTI_04G00610.1 No alias Ribosomal protein L36e [Interproscan]. 0.25 OrthoFinder
Sro327_g118470.1 Contig839.g9255 60S ribosomal protein L36 0.3 OrthoFinder
SymbC1.scaffold1291.12 1291.12 Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1291.13 1291.13 Ribosomal protein L36e [Interproscan]. 0.04 OrthoFinder
TP04G05720.1 No alias Ribosomal protein L36e [Interproscan]. 0.28 OrthoFinder
Vocar.0031s0112.1 32890137 Ribosomal protein L36e [Interproscan]. 0.12 OrthoFinder
XM_003056471.1 MicpuC2_31782, 31782 60S ribosomal protein L36 (RPL36) 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56617.1_9463 PRW56617 60S ribosomal L36-3-like 0.08 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499503.1_8456 KAA8499503 60S ribosomal protein L36-1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 3 95
No external refs found!