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  5. XM_002506874.1

XM_002506874.1 (MICPUN_88922, 88922)


Aliases : MICPUN_88922, 88922

Description : Cytochrome b6/f complex iron-sulfur subunit, chloroplast precursor (PETC)


Gene families : OG_01_0001581 (OrthoFinder) Phylogenetic Tree(s): OG0001581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506874.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000970.19 tig00000970_g5838.t1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder
Cre11.g467689 30775730, PETC Photosynthesis.photophosphorylation.cytochrome b6/f... 0.06 OrthoFinder
Cz13g12160.t1 No alias Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.03 OrthoFinder
EOD17793 No alias Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.02 OrthoFinder
OT_01G06660.1 No alias Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.1 OrthoFinder
PTI_11G00460.1 No alias Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.03 OrthoFinder
Transcript_contig_78467 78467 Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.02 OrthoFinder
Vocar.0009s0349.1 32893192 Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.05 OrthoFinder
XM_003063058.1 MicpuC2_36185, 36185 Cytochrome b6/f complex iron-sulfur subunit, chloroplast... 0.05 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50973.1_1020 PRW50973 Cytochrome b6 f complex iron-sulfur chloroplast precursor 0.02 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491834.1_4842 KAA8491834 Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 104 174
No external refs found!