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  5. XM_002506683.1

XM_002506683.1 (MICPUN_104601, 104601)


Aliases : MICPUN_104601, 104601

Description : Splicing factor 3A subunit 1; SWAP/Surp; Ubiquitin-like domain [Interproscan].


Gene families : OG_01_0002237 (OrthoFinder) Phylogenetic Tree(s): OG0002237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506683.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021501.12 tig00021501_g21952.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cre06.g307450 30779768, SPL1 RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder
Dusal.0015s00045.1 33190948 Splicing factor 3A subunit 1; SWAP/Surp [Interproscan]. 0.03 OrthoFinder
XM_003062813.1 MicpuC2_42493, 42493 Splicing factor 3A subunit 1; SWAP/Surp [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR022030 SF3A1_dom 234 452
IPR000061 Surp 50 101
IPR000061 Surp 165 216
IPR000626 Ubiquitin-like_dom 632 702
No external refs found!