XM_002506682.1 (MICPUN_64827, 64827)


Aliases : MICPUN_64827, 64827

Description : Cleavage stimulation factor subunit 2, hinge domain; Transcription termination and cleavage factor, C-terminal domain; RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506682.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Dusal.0028s00033.1 33198481 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
EOD23362 No alias RNA recognition motif domain [Interproscan]. 0.05 OrthoFinder
OT_01G05710.1 No alias RNA recognition motif domain; Cleavage stimulation... 0.03 OrthoFinder
PTI_05G02190.1 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0729.1 32886056 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0376.1 32887918 Cleavage stimulation factor subunit 2, hinge domain; RNA... 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56872.1_9478 PRW56872 RNA recognition motif-containing 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 78
IPR026896 CSTF_C 277 310
IPR025742 CSTF2_hinge 134 192
No external refs found!