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  5. XM_002506673.1

XM_002506673.1 (MICPUN_96092, 96092)


Aliases : MICPUN_96092, 96092

Description : Glycine hydroxymethyltransferase (SHMT2_GHMT2)


Gene families : OG_01_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506673.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cre09.g411900 30781084, SHMT3 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.05 OrthoFinder
OT_19G00180.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold380.5 380.5 Methylenetetrahydrofolate reductase; Serine... 0.02 OrthoFinder
Vocar.0013s0225.1 32896458 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 1 378
No external refs found!