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  5. XM_002506582.1

XM_002506582.1 (MICPUN_104463, 104463)


Aliases : MICPUN_104463, 104463

Description : Endonuclease/exonuclease/phosphatase; Zinc finger, GRF-type [Interproscan].


Gene families : OG_01_0000344 (OrthoFinder) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506582.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2381.9 2381.9 Endonuclease/exonuclease/phosphatase [Interproscan]. 0.02 OrthoFinder
Vocar.0017s0019.1 32891427 Zinc finger, GRF-type;... 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492584.1_9277 KAA8492584 DNA-(apurinic or apyrimidinic site) lyase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 29 357
IPR010666 Znf_GRF 532 578
No external refs found!