1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002506509.1

XM_002506509.1 (MICPUN_105009, 105009)


Aliases : MICPUN_105009, 105009

Description : Chlorophyll a/b-binding protein (LI818R)


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506509.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cre08.g365900 30773702, LHCSR1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cz16g02040.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
EOD05780 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD15375 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
PTI_01G10030.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
PTI_05G00320.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
PTI_14G03460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Sro1430_g271970.1 Contig4579.g34184 B binding protein L1818, chloroplastic 0.02 OrthoFinder
Sro1506_g278310.1 Contig3888.g29862 Chloroplastic 0.02 OrthoFinder
Sro2423_g327210.1 Contig3569.g27581 Chloroplastic 0.03 OrthoFinder
Sro412_g137900.1 Contig2922.g23262 Chloroplastic 0.02 OrthoFinder
Sro60_g034620.1 Contig797.g8939 Chloroplastic 0.02 OrthoFinder
Sro698_g189300.1 Contig480.g6500 Chlorophyll a 0.02 OrthoFinder
Sro74_g040880.1 Contig4700.g34950 I chlorophyll a/b-binding protein 0.02 OrthoFinder
SymbC1.scaffold5079.2 5079.2 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP01G11130.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP08G04750.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP19G02190.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP23G01270.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
XM_003055117.1 MicpuC2_50637, 50637 Chlorophyll a/b-binding protein-like protein,... 0.03 OrthoFinder
XM_003063198.1 MicpuC2_53102, 53102 Chlorophyll a/b-binding protein (LI818R) 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499797.1_8750 KAA8499797 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8493980.1_3844 KAA8493980 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492420.1_9113 KAA8492420 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006166 purine ribonucleoside salvage IEP Enrichment
BP GO:0006190 inosine salvage IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042278 purine nucleoside metabolic process IEP Enrichment
BP GO:0042451 purine nucleoside biosynthetic process IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
BP GO:0043101 purine-containing compound salvage IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046102 inosine metabolic process IEP Enrichment
BP GO:0046103 inosine biosynthetic process IEP Enrichment
BP GO:0046128 purine ribonucleoside metabolic process IEP Enrichment
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Enrichment
MF GO:0050483 IMP 5'-nucleotidase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 43 198
No external refs found!