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  5. XM_002506300.1

XM_002506300.1 (MICPUN_64421, 64421)


Aliases : MICPUN_64421, 64421

Description : Ribosomal protein S16 [Interproscan].


Gene families : OG_01_0001483 (OrthoFinder) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506300.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre12.g494450 30791769, PRPS16 30S ribosomal protein S16, chloroplastic OS=Staurastrum... 0.21 OrthoFinder
Cz04g32230.t1 No alias Ribosomal protein S16 [Interproscan]. 0.19 OrthoFinder
Dusal.0140s00006.1 33196367 Ribosomal protein S16 [Interproscan]. 0.03 OrthoFinder
OT_16G01850.1 No alias Ribosomal protein S16 [Interproscan]. 0.16 OrthoFinder
Sro133_g063150.1 Contig2274.g18874 Protein S16 0.03 OrthoFinder
Sro51_chlor_g029400.1 Rps16 Rps16 0.01 OrthoFinder
TPCG02150.1 No alias Ribosomal protein S16 [Interproscan]. 0.06 OrthoFinder
Vocar.0031s0013.1 32890135 Ribosomal protein S16 [Interproscan]. 0.06 OrthoFinder
XM_003063439.1 MicpuC2_48856, 48856 Ribosomal protein S16 [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000122.1_cds_GFH07884.1_2361 HaLaN_02753, GFH07884 Ribosomal protein S16 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR000307 Ribosomal_S16 53 109
No external refs found!