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  5. XM_002506180.1

XM_002506180.1 (MICPUN_64181, 64181)


Aliases : MICPUN_64181, 64181

Description : RNA pseudouridylate synthase


Gene families : OG_01_0001151 (OrthoFinder) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506180.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cz04g17260.t1 No alias Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.03 OrthoFinder
PTI_04G01180.1 No alias Pseudouridine synthase, RsuA/RluA [Interproscan]. 0.02 OrthoFinder
TP19G01490.1 No alias Pseudouridine synthase, RsuA/RluA; Janus [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60645.1_4377 PRW60645 RNA pseudouridine synthase chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluA 192 416
No external refs found!