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  5. XM_002506086.1

XM_002506086.1 (MICPUN_88188, 88188)


Aliases : MICPUN_88188, 88188

Description : Helicase, C-terminal; Helicase-associated domain; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0000129 (OrthoFinder) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506086.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cz05g07080.t1 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
EOD09087 No alias Helicase, C-terminal; Domain of unknown function... 0.02 OrthoFinder
EOD25315 No alias Helicase, C-terminal; Helicase-associated domain;... 0.02 OrthoFinder
OT_03G04780.1 No alias Helicase-associated domain; Helicase, C-terminal; Domain... 0.03 OrthoFinder
OT_06G02830.1 No alias Helicase-associated domain; Helicase, C-terminal; Domain... 0.02 OrthoFinder
PTI_28G00540.1 No alias Helicase, C-terminal; Helicase-associated domain; Domain... 0.02 OrthoFinder
XM_003056713.1 MicpuC2_697, 697 Helicase, C-terminal; Helicase-associated domain; Domain... 0.03 OrthoFinder
XM_003058268.1 MicpuC2_39554, 39554 Helicase, C-terminal; Helicase-associated domain; Domain... 0.04 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58696.1_7838 PRW58696 Helicase domain-containing 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20239.1_5726 PRW20239 ATP-dependent RNA helicase DHX36 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 275 401
IPR011545 DEAD/DEAH_box_helicase_dom 21 180
IPR007502 Helicase-assoc_dom 467 538
No external refs found!