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  5. XM_002506017.1

XM_002506017.1 (MICPUN_88344, 88344)


Aliases : MICPUN_88344, 88344

Description : Leucine-rich repeat; Leucine rich repeat 4 [Interproscan].


Gene families : OG_01_0000713 (OrthoFinder) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506017.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
XM_002502595.1 MICPUN_81826, 81826 Leucine-rich repeat; Leucine rich repeat 4 [Interproscan]. 0.01 OrthoFinder
XM_002503728.1 MICPUN_101709, 101709 U box domain; Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 188 227
IPR001611 Leu-rich_rpt 119 177
IPR001611 Leu-rich_rpt 28 85
No external refs found!