XM_002505884.1 (MICPUN_88240, 88240)


Aliases : MICPUN_88240, 88240

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505884.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
EOD35412 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
EOD35541 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
PTI_07G02520.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
PTI_13G02060.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1631_g287230.1 Contig2461.g20146 Leptomycin B resistance protein pmd1 0.05 OrthoFinder
SymbC1.scaffold10331.2 10331.2 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
lcl|BLLF01002502.1_cds_GFH24318.1_18795 HaLaN_22091, GFH24318 ATP-binding cassette transporter 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 19 289
IPR003439 ABC_transporter-like_ATP-bd 362 511
No external refs found!