XM_002505743.1 (MICPUN_92304, 92304)

Aliases : MICPUN_92304, 92304

Description : Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal [Interproscan].

Gene families : OG_01_0001071 (OrthoFinder) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_002505743.1
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000361.54	tig00000361_g24402.t1	Protein biosynthesis.organelle translation...	0.02	OrthoFinder
Cre10.g423650	30790265, PRPL11	Protein biosynthesis.organelle translation...	0.24	OrthoFinder
Cz11g03060.t1	No alias	Ribosomal protein L11, C-terminal; Ribosomal protein...	0.08	OrthoFinder
EOD25013	No alias	Ribosomal protein L11, C-terminal; Ribosomal protein...	0.06	OrthoFinder
EOD40511	No alias	50S ribosomal protein L11 [Ensembl].	0.06	OrthoFinder
OT_14G01140.1	No alias	Ribosomal protein L11, N-terminal; Ribosomal protein...	0.21	OrthoFinder
Sro10_g007800.1	Contig1.g4	50S ribosomal protein L11	0.02	OrthoFinder
Sro51_chlor_g030320.1	Rpl11	Rpl11	0.11	OrthoFinder
TPCG00670.1	No alias	Ribosomal protein L11, C-terminal; Ribosomal protein...	0.08	OrthoFinder
Vocar.0030s0022.1	32894461	Ribosomal protein L11, C-terminal; Ribosomal protein...	0.04	OrthoFinder
XM_003063782.1	MicpuC2_29915, 29915	Ribosomal protein L11, N-terminal; Ribosomal protein...	0.09	OrthoFinder
lcl\|BLLF01005196.1_cds_GFH30861.1_25338	HaLaN_29790, GFH30861	50S ribosomal protein L11	0.1	OrthoFinder
lcl\|LHPG02000017.1_cds_PRW33322.1_3528	PRW33322	50S ribosomal L11	0.12	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004827	proline-tRNA ligase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	Enrichment
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	Enrichment
CC	GO:0009507	chloroplast	IEP	Enrichment
CC	GO:0009536	plastid	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
BP	GO:0034311	diol metabolic process	IEP	Enrichment
BP	GO:0034312	diol biosynthetic process	IEP	Enrichment
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Enrichment
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Enrichment
MF	GO:0042802	identical protein binding	IEP	Enrichment
MF	GO:0042803	protein homodimerization activity	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	Enrichment
BP	GO:0046165	alcohol biosynthetic process	IEP	Enrichment
BP	GO:0046173	polyol biosynthetic process	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR020784	Ribosomal_L11_N	3	66
IPR020783	Ribosomal_L11_C	71	139

External Links

No external refs found!

XM_002505743.1 (MICPUN_92304, 92304)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation