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  5. XM_002505608.1

XM_002505608.1 (MICPUN_63410, 63410)


Aliases : MICPUN_63410, 63410

Description : Transcription factor CBF/NF-Y/archaeal histone domain; High mobility group box domain [Interproscan].


Gene families : OG_01_0000533 (OrthoFinder) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505608.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cre03.g193900 30787431 No description available 0.03 OrthoFinder
Cz01g10020.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain;... 0.04 OrthoFinder
Cz10g28030.t1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
EOD13497 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
OT_11G00340.1 No alias Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
OT_14G01770.1 No alias High mobility group box domain; Transcription factor... 0.03 OrthoFinder
Sro1203_g252110.1 Contig3938.g30205 HMG (high mobility group) box 0.02 OrthoFinder
Transcript_contig_54854 54854 High mobility group box domain; Transcription factor... 0.02 OrthoFinder
Vocar.0018s0169.1 32898495 Transcription factor CBF/NF-Y/archaeal histone domain... 0.02 OrthoFinder
XM_003056745.1 MicpuC2_8931, 8931 Transcription factor CBF/NF-Y/archaeal histone domain... 0.03 OrthoFinder
XM_003059925.1 MicpuC2_40449, 40449 High mobility group box domain; Transcription factor... 0.06 OrthoFinder
lcl|BLLF01001166.1_cds_GFH17549.1_12026 HaLaN_14211, GFH17549 HMG box domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58313.1_8175 PRW58313 High mobility group 0.02 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491861.1_4869 KAA8491861 Transcription factor CBF/NF-Y/archaeal histone domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0030099 myeloid cell differentiation IEP Enrichment
BP GO:0030154 cell differentiation IEP Enrichment
BP GO:0030218 erythrocyte differentiation IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0048869 cellular developmental process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 5 74
IPR003958 CBFA_NFYB_domain 100 160
No external refs found!