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  5. XM_002505561.1

XM_002505561.1 (MICPUN_68903, 68903)


Aliases : MICPUN_68903, 68903

Description : K Homology domain, type 2 [Interproscan].


Gene families : OG_01_0000997 (OrthoFinder) Phylogenetic Tree(s): OG0000997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505561.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020878.28 tig00020878_g14876.t1 No description available 0.03 OrthoFinder
Cre02.g141706 30785085 GTPase ERA1, chloroplastic OS=Zea mays 0.02 OrthoFinder
Dusal.0316s00010.1 33189586 K Homology domain, type 2; GTP binding domain [Interproscan]. 0.04 OrthoFinder
OT_14G00750.1 No alias K Homology domain, type 2; GTP binding domain [Interproscan]. 0.08 OrthoFinder
PTI_15G00360.1 No alias K Homology domain, type 2; GTP binding domain [Interproscan]. 0.02 OrthoFinder
Sro1947_g307140.1 Contig4111.g31365 GTPase ERA 0.01 OrthoFinder
Sro680_g186170.1 Contig3657.g28231 GTPase ERA 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 152 230
No external refs found!