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  5. XM_002505560.1

XM_002505560.1 (MICPUN_54755, 54755)


Aliases : MICPUN_54755, 54755

Description : Pentapeptide repeat [Interproscan].


Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002505560.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001628.6 tig00001628_g9433.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021038.68 tig00021038_g17555.t1 No description available 0.01 OrthoFinder
Cre16.g687300 30777804 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.05 OrthoFinder
Cre17.g721700 30782709, CPLD44 Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 OrthoFinder
Cz06g31120.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz06g31130.t1 No alias Pentapeptide repeat [Interproscan]. 0.07 OrthoFinder
Cz07g01040.t1 No alias Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder
Dusal.0084s00031.1 33201430 Pentapeptide repeat [Interproscan]. 0.04 OrthoFinder
EOD41761 No alias Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
OT_20G00280.1 No alias Pentapeptide repeat [Interproscan]. 0.04 OrthoFinder
Sro352_g124290.1 Contig2645.g21405 Pathogenesis 0.03 OrthoFinder
Sro404_g135940.1 Contig4176.g31854 Thylakoid lumenal 15 kDa protein 0.03 OrthoFinder
Transcript_contig_54693 54693 Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
XM_003063673.1 MicpuC2_65966, 65966 Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 24 57
No external refs found!